CDS

Accession Number TCMCG007C52084
gbkey CDS
Protein Id XP_009111711.2
Location complement(join(3235386..3235613,3235685..3236152,3236573..3237648,3238406..3238559,3238662..3238761,3238829..3238968))
Gene LOC103837134
GeneID 103837134
Organism Brassica rapa

Protein

Length 721aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009113463.3
Definition glutamate--tRNA ligase, cytoplasmic [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category J
Description Belongs to the class-I aminoacyl-tRNA synthetase family
KEGG_TC -
KEGG_Module M00121        [VIEW IN KEGG]
M00359        [VIEW IN KEGG]
M00360        [VIEW IN KEGG]
KEGG_Reaction R05578        [VIEW IN KEGG]
KEGG_rclass RC00055        [VIEW IN KEGG]
RC00523        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01007        [VIEW IN KEGG]
ko02048        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
KEGG_ko ko:K01885        [VIEW IN KEGG]
EC 6.1.1.17        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00860        [VIEW IN KEGG]
ko00970        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
ko01120        [VIEW IN KEGG]
map00860        [VIEW IN KEGG]
map00970        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
map01120        [VIEW IN KEGG]
GOs GO:0002181        [VIEW IN EMBL-EBI]
GO:0002376        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004812        [VIEW IN EMBL-EBI]
GO:0004818        [VIEW IN EMBL-EBI]
GO:0004827        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006412        [VIEW IN EMBL-EBI]
GO:0006417        [VIEW IN EMBL-EBI]
GO:0006418        [VIEW IN EMBL-EBI]
GO:0006424        [VIEW IN EMBL-EBI]
GO:0006433        [VIEW IN EMBL-EBI]
GO:0006518        [VIEW IN EMBL-EBI]
GO:0006520        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006811        [VIEW IN EMBL-EBI]
GO:0006820        [VIEW IN EMBL-EBI]
GO:0006869        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006952        [VIEW IN EMBL-EBI]
GO:0006955        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008270        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010243        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0010876        [VIEW IN EMBL-EBI]
GO:0015711        [VIEW IN EMBL-EBI]
GO:0015718        [VIEW IN EMBL-EBI]
GO:0015849        [VIEW IN EMBL-EBI]
GO:0015908        [VIEW IN EMBL-EBI]
GO:0015909        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016874        [VIEW IN EMBL-EBI]
GO:0016875        [VIEW IN EMBL-EBI]
GO:0017101        [VIEW IN EMBL-EBI]
GO:0017148        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0019899        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032269        [VIEW IN EMBL-EBI]
GO:0032868        [VIEW IN EMBL-EBI]
GO:0032869        [VIEW IN EMBL-EBI]
GO:0032870        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0034097        [VIEW IN EMBL-EBI]
GO:0034248        [VIEW IN EMBL-EBI]
GO:0034249        [VIEW IN EMBL-EBI]
GO:0034341        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0035613        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0042803        [VIEW IN EMBL-EBI]
GO:0043038        [VIEW IN EMBL-EBI]
GO:0043039        [VIEW IN EMBL-EBI]
GO:0043043        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043169        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043434        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0043603        [VIEW IN EMBL-EBI]
GO:0043604        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044539        [VIEW IN EMBL-EBI]
GO:0045087        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046872        [VIEW IN EMBL-EBI]
GO:0046914        [VIEW IN EMBL-EBI]
GO:0046942        [VIEW IN EMBL-EBI]
GO:0046983        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051020        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051248        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071345        [VIEW IN EMBL-EBI]
GO:0071346        [VIEW IN EMBL-EBI]
GO:0071375        [VIEW IN EMBL-EBI]
GO:0071417        [VIEW IN EMBL-EBI]
GO:0071495        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097452        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:0140101        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901652        [VIEW IN EMBL-EBI]
GO:1901653        [VIEW IN EMBL-EBI]
GO:1901698        [VIEW IN EMBL-EBI]
GO:1901699        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1901701        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAAAGGATCAAGCTTTCTTTCCCAGCTGACACTCCACCACTCTCAGTCATCGCTGCTCTCCATATCTCATCCTCTCCGGTGACTATCGACTCCTCCTCCGCCGCAGCCACCGTCCCCACCTTCGTCTTCTCCGACGGGCGTAAGCTGAGTGGAACCTCCGTTCTTCTCCGCTACGTTGCTCGATCAGCTCCCTCGCTTCCTACCTTCTACGGCCACGATGCTTTTGAATCTTCTCAGATTGATGAGTGGGTGGATTATGCTTGTGTCTTCGCCTCTGGCTCTGAGTTTGAGAACGCTTGCTCTCGCGTAGATAACTACCTTCAAAGTGCAACCTTTCTTGTCGGTCATTCTCTTTCCATTGCCGATGTTGCTGTTTGGTCAGCTCTCTCTGGATCGGGTCCAAGATGGGAGAGTTTGAGGAAATCGAAAAAGTATCAGAATCTGGTTAGATGGTTCAACTCTATATCGCTTGAGTACGCCGAGCCTCTCAGCAAGGTAGCAGCATATACTGTGAAGAAAGGCTCAGGGAAGCCTGTTGCTGCATCCAAGTCCAAAGACCAACAAACAGACGCTAATGACAAAGGAAAACCTGAAGTGGACTTGCCTGGTGCAGTCATGGGAAAGGTCAAGCTCCGGTTTGCTCCAGAGCCGAGCGGTTACCTCCACATCGGACACGCGAAAGCTGCGCTGCTGAACAAGTACTTCGCGGAGCGGTACCAAGGGGAAGTCATTGTGCGTTTTGACGACACTAACCCTGCTAAAGAGAGCAACGAGTTTGTTGATAATCTTGTCAAGGACATTGGTACCTTGGGGATCAAGTATGAGAGAGTGACCTACACTTCTGATTATTTCCCTGAGCTGATGGACATGGCGGAGAAGCTTATGCGCGAAGGTAAGGCTTACGTCGACGACACGCCGAGGGAGCAGATGCAGAAAGAGAGGATGGATGGGATTGATTCGAAGTGTAGGAACCATAGCGTTGAGGAGAATCTGAAGCTGTGGAAGGAAATGATTGAGGGAAGTGAGAGAGGGTTACAGTGTTGCGTGCGCGGGAAGTTAGACATGCAAGATCCCAACAAAGCTATGAGAGATCCTGTTTATTACAGATGCAACCCTATGTCTCACCACCGTATAGGGAACAAGTATAAGATATATCCAACGTATGACTTTGCCTGCCCGTTTGTTGATTCTATTGAAGGTATAACGCATGCTCTTCGGTCTAGTGAGTATCATGACAGGAATGCTCAGTACTATAAGGTTCTGGAGGATATGGGATTGAGGAGAGTTGAGATTTATGAGTTTAGCAGGTTGAATCTTGTTTACACTCTTTTGAGTAAGCGGAAGCTTCTATGGTTTGTTCAGCAAGGGTTGGTTGGTGGGTGGGATGATCCTCGCTTCCCTACAGTGCAAGGCATTGTTCGTAGAGGTTTGAAAATTGAGGCTCTGATTCAGTTCATTCTCGAGCAGGGTGCTTCCAAGAATCTAAACTTGATGGAATGGGACAAGCTGTGGACTATTAACAAGAAGATCATCGACCCTGTGTGTCCTAGACACACGGCTGTGATTGAAGAGCGGCGTGTACTGTTGACATTAACCGATGGTCCTGATGAGCCGTTTGTCCGTTTAATACCAAAGCACAAGAAGTTCGAAGGTGCCGGAGAGAAGGCTACCACTTTCACCAAGAGGATATGGATAGAGGGAGCTGATGCGAGCGCCATCTCTGTTGGTGAGGAAGTGACTTTGATGGATTGGGGAAACGCCATTGTTAAAGAGATTACTAAAGACGAGGAAGGTCGTGTCACTGCGTTATCTGGCGTTTTGAATCTCCAAGGATCTGTGAAGACTACAAAGCTGAAGCTCACATGGTTGCCTGAGATTGATGAGTTGGTCAAGCTCACATTAACAGATTTTGATTACTTAATCACCAAGAAGAAGCTGGAGGAAGATGATGAGGTTGCTACATTTGTGAATCCTTACACGAAGAAGGAAACATTAGCACTTGGTGATTCTAATATGAGGAGTCTGAAGTGTGGAGATGTGATTCAGCTTGAGAGGAAAGGCTATTACAGATGTGATGTTCCTTTTGTCAAACCTTCAAAGCCCATTGTCTTATTCTCAATTCCAGATGGAAGGCAACACCAGCCACTCTCTGCTGCTAAGTGA
Protein:  
MERIKLSFPADTPPLSVIAALHISSSPVTIDSSSAAATVPTFVFSDGRKLSGTSVLLRYVARSAPSLPTFYGHDAFESSQIDEWVDYACVFASGSEFENACSRVDNYLQSATFLVGHSLSIADVAVWSALSGSGPRWESLRKSKKYQNLVRWFNSISLEYAEPLSKVAAYTVKKGSGKPVAASKSKDQQTDANDKGKPEVDLPGAVMGKVKLRFAPEPSGYLHIGHAKAALLNKYFAERYQGEVIVRFDDTNPAKESNEFVDNLVKDIGTLGIKYERVTYTSDYFPELMDMAEKLMREGKAYVDDTPREQMQKERMDGIDSKCRNHSVEENLKLWKEMIEGSERGLQCCVRGKLDMQDPNKAMRDPVYYRCNPMSHHRIGNKYKIYPTYDFACPFVDSIEGITHALRSSEYHDRNAQYYKVLEDMGLRRVEIYEFSRLNLVYTLLSKRKLLWFVQQGLVGGWDDPRFPTVQGIVRRGLKIEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEERRVLLTLTDGPDEPFVRLIPKHKKFEGAGEKATTFTKRIWIEGADASAISVGEEVTLMDWGNAIVKEITKDEEGRVTALSGVLNLQGSVKTTKLKLTWLPEIDELVKLTLTDFDYLITKKKLEEDDEVATFVNPYTKKETLALGDSNMRSLKCGDVIQLERKGYYRCDVPFVKPSKPIVLFSIPDGRQHQPLSAAK